amici.ode_model.EventObservable

class amici.ode_model.EventObservable(identifier, name, value, event, measurement_symbol=None, transformation='lin')[source]

An Event Observable links model simulations to event related experimental measurements, abbreviated by z.

__init__(identifier, name, value, event, measurement_symbol=None, transformation='lin')[source]

Create a new EventObservable instance.

Parameters

identifier (sympy.core.symbol.Symbol) – See Observable.__init__().
name (str) – See Observable.__init__().
value (sympy.core.expr.Expr) – See Observable.__init__().
transformation (typing.Optional[amici.import_utils.ObservableTransformation]) – See Observable.__init__().
event (sympy.core.symbol.Symbol) – Symbolic identifier of the corresponding event.

Methods Summary

`__init__`(identifier, name, value, event[, ...])	Create a new EventObservable instance.
`get_event`()	Get the symbolic identifier of the corresponding event.
`get_id`()	ModelQuantity identifier
`get_measurement_symbol`()	rtype `sympy.core.symbol.Symbol`
`get_name`()	ModelQuantity name
`get_regularization_symbol`()	rtype `sympy.core.symbol.Symbol`
`get_val`()	ModelQuantity value
`set_val`(val)	Set ModelQuantity value

Methods

__init__(identifier, name, value, event, measurement_symbol=None, transformation='lin')[source]

Create a new EventObservable instance.

Parameters

identifier (sympy.core.symbol.Symbol) – See Observable.__init__().
name (str) – See Observable.__init__().
value (sympy.core.expr.Expr) – See Observable.__init__().
transformation (typing.Optional[amici.import_utils.ObservableTransformation]) – See Observable.__init__().
event (sympy.core.symbol.Symbol) – Symbolic identifier of the corresponding event.

Get the symbolic identifier of the corresponding event.

get_id()

ModelQuantity identifier

get_measurement_symbol()

get_name()

ModelQuantity name

get_regularization_symbol()

get_val()

ModelQuantity value

set_val(val)

Set ModelQuantity value