How to cite AMICI

Citable DOI for the latest AMICI release:

AMICI release DOI

There is a list of publications using AMICI. If you used AMICI in your work, we are happy to include your project, please let us know via a Github issue.

When using AMICI in your project, please cite

  • Fröhlich, F., Kaltenbacher, B., Theis, F. J., & Hasenauer, J. (2017). Scalable Parameter Estimation for Genome-Scale Biochemical Reaction Networks. PLOS Computational Biology, 13(1), e1005331. doi:10.1371/journal.pcbi.1005331.


  • Fröhlich, F., Theis, F. J., Rädler, J. O., & Hasenauer, J. (2017). Parameter estimation for dynamical systems with discrete events and logical operations. Bioinformatics, 33(7), 1049-1056. doi:10.1093/bioinformatics/btw764.

When presenting work that employs AMICI, feel free to use one of the icons in documentation/gfx/, which are available under a CC0 license: