amici.ode_export.Observable¶

class amici.ode_export.Observable(identifier, name, value, measurement_symbol=None)[source]¶

An Observable links model simulations to experimental measurements, abbreviated by y

Variables: _measurement_symbol – sympy symbol used in the objective function to represent measurements to this observable

__init__(identifier, name, value, measurement_symbol=None)[source]

Create a new Observable instance.

Parameters

identifier (sympy.core.symbol.Symbol) – unique identifier of the Observable
name (str) – individual name of the Observable (does not need to be unique)
value (sympy.core.expr.Expr) – formula

Methods Summary

`__init__`(identifier, name, value[, …])	Create a new Observable instance.
`get_id`()	ModelQuantity identifier
`get_measurement_symbol`()	rtype `sympy.core.symbol.Symbol`
`get_name`()	ModelQuantity name
`get_val`()	ModelQuantity value

Methods

__init__(identifier, name, value, measurement_symbol=None)[source]¶

Create a new Observable instance.

Parameters

identifier (sympy.core.symbol.Symbol) – unique identifier of the Observable
name (str) – individual name of the Observable (does not need to be unique)
value (sympy.core.expr.Expr) – formula

get_id()¶

ModelQuantity identifier

get_measurement_symbol()[source]¶

get_name()¶

ModelQuantity name

get_val()¶

ModelQuantity value