AMICI

About

  • About AMICI
  • Availability
  • License conditions
  • How to cite AMICI
  • References
  • Background
  • Changelog
  • Versioning policy
  • Glossary
  • Contributing

Python

  • Installation
  • Examples
  • Usage
  • FAQ
  • API reference

C++

  • Installation
  • Usage
  • API reference

MATLAB

  • Installation
  • Usage
  • FAQ
  • API reference

Developer's guide

  • AMICI developer’s guide
  • Handling of Discontinuities
AMICI
  • Overview: module code

All modules for which code is available

  • amici
    • amici.amici
    • amici.bngl_import
    • amici.conserved_quantities_demartino
    • amici.conserved_quantities_rref
    • amici.de_export
    • amici.de_model
    • amici.de_model_components
    • amici.gradient_check
    • amici.import_utils
    • amici.jax.model
    • amici.jax.petab
    • amici.logging
    • amici.numpy
    • amici.pandas
    • amici.petab.conditions
    • amici.petab.import_helpers
    • amici.petab.parameter_mapping
    • amici.petab.petab_import
    • amici.petab.pysb_import
    • amici.petab.sbml_import
    • amici.petab.simulations
    • amici.petab.simulator
    • amici.plotting
    • amici.pysb_import
    • amici.sbml_import
    • amici.sbml_utils
    • amici.splines

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